Naxxar Lions (Challenge League): every transfer in and out, fees paid and earned, squad market value.
| Date | Player | From | To | Fee |
|---|---|---|---|---|
| 2026-07-09 | Vitinho | Naxxar Lions | Yongin City | Free |
| 2026-01-12 | Player | Naxxar Lions | Monte Roraima | Free |
| 2025-08-28 | Player | Naxxar Lions | Tampines Rovers | Free |
| 2025-08-14 | Player | Monte Roraima | Naxxar Lions | Free |
| 2025-08-12 | Zamoranho Carliho Leandro Ho-A-Tham | Naxxar Lions | Victoria Rosport | Free |
| 2025-08-03 | Matthias Debono | Hamrun Spartans | Naxxar Lions | Free |
| 2025-08-01 | Nikolai Micallef | Naxxar Lions | Hamrun Spartans | Free |
| 2025-07-01 | Maicon | Naxxar Lions | Borneo | Free |
| 2025-02-04 | Zamoranho Carliho Leandro Ho-A-Tham | Dynamic Herb Cebu | Naxxar Lions | Free |
| 2025-01-31 | Jean Paul Farrugia | Sliema Wanderers | Naxxar Lions | Free |
| 2025-01-16 | Bacary Sane | Hamrun Spartans | Naxxar Lions | Loan |
| 2025-01-14 | Pedro Vitor Gualberto de Assis Barreto | Naxxar Lions | Oeste | Free |
| 2025-01-10 | Maicon | Birkirkara | Naxxar Lions | Free |
| 2025-01-09 | Westherley Garcia Caxambu | Naxxar Lions | Anápolis | Free |
| 2025-01-06 | Matheus Taumaturgo | Naxxar Lions | Maracanã | Free |
| 2025-01-04 | Player | Osaka | Naxxar Lions | Free |
| 2025-01-02 | João Moura | Osaka | Naxxar Lions | Free |
| 2024-09-01 | Player | Naxxar Lions | San Gwann | Free |
| 2024-08-02 | Matheus Taumaturgo | Altos | Naxxar Lions | Free |
| 2024-07-20 | Maicon | Naxxar Lions | Birkirkara | Free |